Molecular Detection of Beta-Globin Gene Mutations of Ethnic Riau Malay Thalassaemia Patients by Polymerase Chain Reaction and Sequens DNA

Authors

  • Elmi Elmi Department of Pediatrics, Arifin Achmad General Hospital, Pekanbaru, Indonesia
  • Ellyza Nasrul lLaboratory of Imunology, Faculty of Medicine, University of Andalas, Padang, Indonesia
  • Sumaryati Syukur Laboratory of Biotechnology Departement of Chemistry, University of Andalas, Padang, Indonesia
  • Susi Susanah Department of Pediatrics, Hasan Sadikin General Hospital, Bandung, Indonesia

Keywords:

Beta-globin gene, thalassaemia, gene mutation, anemia.

Abstract

Beta-thalassaemia major is an autosomal recessive disorder that results in severe microcytic, hypochromic, haemolytic anemia among affected patients. Beta-thalassaemia has emerged as one of the most common public health problems in Indonesia, particularly among Riau Malays. This study aimed to observe the spectrum of mutations found in Riau Malay beta-thalassaemia major patients who attended the Thalassaemia Center, Arifin Achmad Hospital University Riau Pekanbaru, Indonesia. This was a cross-sectional study conducted with 68 Riau Malay beta- thalassaemia major patients. DNA was extracted from the blood collected from the patients and subjected to polymerase chain reaction (PCR) amplification. Pcr product to sequens for the detection of mutations. The results revealed four mutations in the HBB at Riau Malay beta- thalassaemia patients; IVS-1 nt5 (G > C), codon 26/HbE (G > A), IVS-1 nt1 (G > T), IVS-1 nt2 (T> C ) the two most common mutations observed were codon 26 (G >A) and IVS-1 nt5 (G > C). Four  Riau Malay patients in the present study, however, did not show any mutation in studied.

References

[1] Origa R., Beta-Thalassemia. NBCI Bookshelf. A service of the National Library of Medicine, National Institutes of Health 2015. 1-30
[2] Weatherall DJ: The inherited disease of hemoglobin are an emerging global health burden. Blood 2010; 115, pp 4331-4336
[3] Galanello R. & Origa R, beta-thalassemia.Orphanet Journal of Rare Diseases, 2010. 5: 11
[4] Fucharoen S, Ketvitchit P, Pootrakul P, Clinical Manifestation of Beta-thalassemia/ Haemoglobin E Diseasese. J PediatrHaematol Oncol ;22, 2000, pp 552-557
[5] Wahidayat P. A.,Country Report: Current situation of thalassemia management in Indonesia. Presented in 2nd PAN-Asian Conference on haemoglobinopathies. Hanoi-Vietnam., 2015
[6] Model B, Darlison M.Global epidemiology of hemoglobin disorders and derived service indicator. Bull WHO. 2008.86 pp 480-487
[7] Hernanda P. Y., Tursilowati L., G.J Sandra, et al., towards a prevention program for ?-thalassemia. The molecular spectrum in East Java, Indonesia. Hemoglobin.; 2012 , 36(1), pp 1-6.
[6] Yatim N F M & Rahim M. A, Menon Kavitha, et al. Molecular characterization of ?- and ?-thalassaemia among Malay patients. Int. J. Mol. Sci.; 2014,15, pp 8839.
[9] Lantip Rujito, muhammad Basalamah, Abdul Salam. Molecular Scanning of ?- Thalassemia in the Southern Region of Central Java, Indonesia; a Step towards a Local Prevention Program, Hemoglobin, 2015, vol 39
[10] Grosso M, Sessa R, Puzone S, Storino M R and Izzo P, Molecular Basis of Thalassemia, Anemia, Dr. Donald Silverberg (Ed.), (2012). ISBN: 978-953-51-0138-3, InTech, Available from: http://www.intechopen.com/books/anemia/molecular-basis-of-thalassemia
[11] Higgs D.R. & Gibbons R.J. The molecular basis of ?-thalassemia: a model for understanding human molecular genetics. Hematology/Oncology Clinics of North America, (2010). 24, 6, pp. 1033-1054
[12] Azhar, M.,Natalia, D.,Syukur, S.,Vovien. ,Jamsari, Gene Fragments that encodes inulin hydrolysis enzyme from genomic Bacillus licheniformis:Isolation by PCR technique using new primers, International Journal of Biological Chemistry:9 (2) ,(2015), pp 59.
[13] Ginting S F, Syukur S, Ibrahim S,and Tjong D H, The Influence of Estradiol and HDL-Cholesterol levels on Breast Cancer in Pre-menopause and Menopause Women and Its Correlation with BRCA1 Gene C61G Mutation, American Scientific Journal for Engineering Tehnology and Sciences (ASRJETS], 38(1), (2017), pp 250-257
[14] Ginting, S,F, Syukur S, Ibrahim, S, Tjong, D, H, and Fachrial E, Lipid profile and estradiol analysis between pre-menopose and post-menopause woman in Medan areas of North Sumatra, Indonesia, journal of Chemical and Pharmaceutical Research,7(10), (2015) pp 505-508
[15] Sihombing B, Syukur S, Ibrahim S, Cong HD and Setyoheryanto D, Gene Expression, P53 and Bcl-2 as Markers of Prostate Cancer Progression, American Scientific Journal for Engineering Tehnology and Sciences, (ASRJETS], 35, (1), (2017), pp 8-14

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Published

2017-12-10

How to Cite

Elmi, E., Nasrul, E., Syukur, S., & Susanah, S. (2017). Molecular Detection of Beta-Globin Gene Mutations of Ethnic Riau Malay Thalassaemia Patients by Polymerase Chain Reaction and Sequens DNA. American Scientific Research Journal for Engineering, Technology, and Sciences, 38(2), 18–22. Retrieved from https://asrjetsjournal.org/index.php/American_Scientific_Journal/article/view/3245

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